Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMIKKNASSEDFFILLGFSNWPQLEVVLFVVILIFYLMTLTGNLFIIILSYVDSHLHTPMYFFLSNLSFLDLCHTTSSIPQLLVNLRGPEKTISYAGCMVQLYFVLALGIAECVLLVVMSYDRYVAVCRPLHYTVLMHPRFCHLLAAASWVIGFTISALHSSFTFWVPLCGHRLVDHFFCEVPALLRLSC-VDTHA------NELTLMVMSSIFVLIPLILILTAYG----AIARAVLSMQSTTGLQKVFRTCGAHLMVVSLFF----IPVMCMYLQPPSENSPDQGKF---IALFYTVVTPSLNPLIYTLRNKHVKGAAKRLLGWEWGK
1LN6 Chain:A ((55-312))------------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMALACAA--------PPLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVVATTLCCGK


General information:
TITO was launched using:
RESULT:

Template: 1LN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -222853 for 1838 contacts (-121.2/contact) +
2D Compatibility (PS) -22576 + (NN) 13991 + (LL) 5368
1D Compatibility (HY) -20000 + (ID) 3000
Total energy: -249070.0 ( -135.51 by residue)
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_1LN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LN6-query.scw
PDB file : Tito_Scwrl_1LN6.pdb: