Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFYHVGQAAFELLTSSFILVGFSDRPHLELIVFVVVLIFYLLTLLG---NMTIVLLSALDSRLHTPMYFFLANLSFLDMCFTTGSIPQMLYN------LWGPDKTISYVGCAIQLYFVLALGGVECVLLAVMAYDRYAAVCKPLHYTIIMHPRLCGQLASVAWLSGFGNSLIMAPQTLMLPRCGHRRVDHFLCEMPALIGMAC-------VDTMMLEALAFALAIFII--LAPLILILISYGYVGGTVLRIKSAAGRK----KAFNTCSSHLIVVSL--------FYGTIIYMYLQPANTYSQDQGKFLTL--FYTIVTPSVNPLIYTLRNKDVKEAMKKVLGKGSAEI |
| 1L9H Chain:A ((48-326)) | ----------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGP------TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHA----IMGVAFTWVMALACAAPPLVGWSR---YIPE-----GMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL---VFTVKEAAA--ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP---IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212761 for 1821 contacts (-116.8/contact) +
2D Compatibility (PS) -24183 + (NN) 344 + (LL) 5980
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -234420.0 ( -128.73 by residue)
QMean score : 0.170
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