Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAWSNQSAVTEFILRGLSSSLELQIFYFLFFSIVYAATVLGNLLIVVTIASEPHLHSPMYFLLGNLSFIDMSLASFATPKMIADFLREHKAISFEGCMTQMFFLHLLGGAEIVLLISMSFDRYVAICKPLHYLTIMSRRMCVGLVILSWIVGIFHALSQL-AFTVNLPFCGPNEVDSFFCDLPLVIKLACVDTYILGVFMISTSGMIALV----CFILLVISYTIILVTVRQRSSGGSSKALSTCSAHFTVVTLFF--------GPCTFIYVWPFTNF-PIDKVLSVFYTIYTPLLNPVIYTVRNKDVKYSMRKLSSHIFKSRKTDHTP |
| 2G87 Chain:A ((58-318)) | -----------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG-VAFTWVMALACAAPPLVGWSRYIP-----EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLV--FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEAS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2G87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225591 for 1871 contacts (-120.6/contact) +
2D Compatibility (PS) -24174 + (NN) 4465 + (LL) 4236
1D Compatibility (HY) 1600 + (ID) 900
Total energy: -240364.0 ( -128.47 by residue)
QMean score : 0.131
|
|
|