Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEAMKLLNQSQVSEFILLGLTSSQDVEFLLFALFSVIYVVTVLGNLLIIVTVFNTPNLNTPMYFLLGNLSFVD--MTLASFATPKVILNLLKKQKVISFAGCFTQIFLLHLLGGVEMVLLVSMAFDRYVAICKPLHYMTIMNKKVCVLLVVTSWLLGLLHSGFQIPFAVNLPFCGPNVVDSIFCDLPLVTKLAC-IDIYFVQVVIVANSGIISLSC--FIILLI----SYSLILITIKNHSPTGQS-----KARSTLTAHITVVILFFGPC------IFIYIWPFGNHSVDKFLAVFYTI------ITPILNPIIYTLRNKEMKISMKKLWRAFVNSREDT
2PED Chain:A ((58-318))--------------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTT--TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMAL---------ACAAP---PLVGWSRY--IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF---THQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDD


General information:
TITO was launched using:
RESULT:

Template: 2PED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -219993 for 1711 contacts (-128.6/contact) +
2D Compatibility (PS) -23447 + (NN) -4355 + (LL) 5084
1D Compatibility (HY) -400 + (ID) 750
Total energy: -243861.0 ( -142.53 by residue)
QMean score : 0.233

(partial model without unconserved sides chains):
PDB file : Tito_2PED.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PED-query.scw
PDB file : Tito_Scwrl_2PED.pdb: