Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSPSAAWLLGAAILLAASLSCSGTIQGTNRSSKGRSLIGKVDGTSHVTGKGVTVETVFSVDE------FSASVLTGKLTTVFLPIVYTIVFVVGLPSNGMALWVFLFRTKKKHPAVIYMANLALADLLSVIWFPLKIAYHIHGNNWIYGEALCNVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMGHSRKKANIAIGISLAIWLLILLVTIPLYVVKQTIFIPALNITTCHDVLPEQLLVGDMFNYFLSLAIGVFLFPAFLTASAYVLMIRMLRSSAMDENSEKKRKRAIKLIVTVLAMYLICFTPSNLLLVVHYF-LIK-----SQGQSHVYALYIVALCLSTLNSCIDPFVYYFVSHDFRDHAKNALLCRSVRTVKQMQVSLTSKKHSRKSSSYSSSSTTVKTSY |
| 4XT3 Chain:A ((26-309)) | --------------------------------------------------------------EDATPCVFTDVLNQSKPVTLFL---YGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH-----ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACL---FSIFWWIFAVIIAIPHFMVVTK---KDNQCMTDYDYLEVSYPI--ILN--VELMLGAFVIPLSVISYCYYRISRIVAVS-----QSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -265878 for 2000 contacts (-132.9/contact) +
2D Compatibility (PS) -27628 + (NN) -10120 + (LL) 7188
1D Compatibility (HY) -34000 + (ID) 3600
Total energy: -334038.0 ( -167.02 by residue)
QMean score : 0.237
|
|
|