Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYILTNLVIARICLISVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFLWLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKHKRNITEMFH-VSK---IPYFEPLTLFNLFAIVPFIVSLISFFLLVRSLWRHTKQIKLYATGSRDPSTEVHVRAIKTMTSFIFFFFLYYISSILMTFSYLM---------TKYKLAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI |
| 2LNL Chain:A ((37-323)) | ---LNKYVVIIAYALVFLLSLLGNSLVMLVIL---YSRVGRSVTDVYLLNLALADLLFALTL-PIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIV---HATRTL-TQ-KRHLVKFVCLGCWGLSMNLSLPFFLFR---Q--A-YHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMG----------QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199888 for 2000 contacts (-99.9/contact) +
2D Compatibility (PS) -26666 + (NN) 1060 + (LL) 2680
1D Compatibility (HY) -22400 + (ID) 2350
Total energy: -247564.0 ( -123.78 by residue)
QMean score : 0.257
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