Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SIQICNVSEDDLMPCMPAVTRSNVQ-PPV-------QPVQACCTVLSTANLSCFCELGNKYPSLLRM-F-R----IDPVLARDLPGECKLNSFPGC
1S6D Chain:A ((20-101))
----------MLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMM---MLNEPMWIRMRDQVMSMAHNLPIECNLMS-QPC
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32689 for 445 contacts (-73.5/contact) +
2D Compatibility (PS) -6910 + (NN) -778 + (LL) 724
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -43753.0 ( -98.32 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: