Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEMSCIQNLLPCKPYLPGTEPPPPVCCLPLKDMVA-------HQAQCLCSALANPDLLKDF-NVTMDGALKLAKTCGASVDMSVCKNGNH
1BWO Chain:A ((8-78))
------SLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR----GIHNLNEDNARSIPPKCGVNLP---------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23980 for 391 contacts (-61.3/contact) +
2D Compatibility (PS) -6727 + (NN) -6880 + (LL) 1264
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -39923.0 ( -102.10 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: