Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSIGLSEILVVVLVSIIVLDKNKVPVFIDLIKNIYRYLTIIKSKARRLLKDAGIEELYKEYNTEKVNYIIGKDGKLYPTYN-IDNTPKDNDSEDSSSRRRAI
1XZO Chain:B ((140-169))
--------------------------------------------------------------------YLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK
General information:
TITO was launched using:
RESULT:
Template:
1XZO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3294 for 120 contacts (27.4/contact) +
2D Compatibility (PS) -3083 + (NN) 358 + (LL) 6580
1D Compatibility (HY) -2800 + (ID) 650
Total energy: 3699.0 ( 30.83 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1XZO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZO-query.scw
PDB file :
Tito_Scwrl_1XZO.pdb
: