Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVRLIPDNLNIKFSKYRKLTALISIILVIFSLFIVVLRGVNLGIDFTGGILMEIKSSSEDHAVLNILKENGFTIQSSKAGNNLVMYFREEGNEGKIKKIKSVLEEKLGSSISYRKIDYIGPRISSTQILEGILSMFIAIVGIFFYVWFRFNWQCGFGGTIALIHDVILTVGFVSLTGIKFNISSVAALLTVIGYSINNSVVIYDRIREYQKSGKNRQMSDIVDASIN--VTLFRTVLTSGTTLLATIPLTLICTDTVRDFSLIIFFGILIGTCSAIFISAPILTCKVLISRIAV |
2PJ6 Chain:A ((180-258)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRNNLSSIKAYLTIHSYS---QMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCEETML |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17837 for 445 contacts (-40.1/contact) +
2D Compatibility (PS) -8138 + (NN) 362 + (LL) 13892
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -15171.0 ( -34.09 by residue)
QMean score : 0.047
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