Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVRLIPDNLNIKFSKYRKLTALISIILVIFSLFIVVLRGVNLGIDFTGGILMEIKSSSEDHAVLNILKENGFTIQSSKAGNNLVMYFREEGNEGKIKKIKSVLEEKLGSSISYRKIDYIGPRISSTQILEGILSMFIAIVGIFFYVWFRFNWQCGFGGTIALIHDVILTVGFVSLTGIKFNISSVAALLTVIGYSINNSVVIYDRIREYQKSGKNRQMSDIVDASIN--VTLFRTVLTSGTTLLATIPLTLICTDTVRDFSLIIFFGILIGTCSAIFISAPILTCKVLISRIAV
2PJ6 Chain:A ((180-258))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRNNLSSIKAYLTIHSYS---QMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCEETML


General information:
TITO was launched using:
RESULT:

Template: 2PJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17837 for 445 contacts (-40.1/contact) +
2D Compatibility (PS) -8138 + (NN) 362 + (LL) 13892
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -15171.0 ( -34.09 by residue)
QMean score : 0.047

(partial model without unconserved sides chains):
PDB file : Tito_2PJ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PJ6-query.scw
PDB file : Tito_Scwrl_2PJ6.pdb: