Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIIKFVL--LLPT-ILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMINVPVVTGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIILFKFSE-NILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITIISPFIVAFIVFITTMVLLVTDSWVTGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKI----WIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
| 4XGC Chain:E ((1-458)) | MEAICSSLEPLFPCREAAIETLGELIGDSSE-----TYPSAIYLFG-HSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYT------TKIMLEILLDSLAPDQGDALKVDN------------MLDFVEQLRRQAATRVEDQGFLIAVDNAERLRDMDANVLPV-LLRLQELTN---LNLCVILLSQLPFEKFY------------NKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQK-----KRLEICQEAVTEDFYNNYLNLFLSVFYKAC------RDVPELQLTARKCLSTYLEPVLDGTSRLWRHIAGPLRSALTQ----IYMRIESLELPYYAKFLLIAAFLASHNA-------AKQDKRLFSTTLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFN-VRQYLCD----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -407551 for 2844 contacts (-143.3/contact) +
2D Compatibility (PS) -39940 + (NN) 14943 + (LL) 4760
1D Compatibility (HY) -16400 + (ID) 3150
Total energy: -447338.0 ( -157.29 by residue)
QMean score : 0.192
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