Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLITLTYNNFKQYAQQGTVPAVEQNNGSKVL---QNSFYKSVYYINSVLWPIKGMLVGVKHD-----LNTSGITMGRREKVV---WGTD---AMIAILALQIYYLYSIQEL-------HIL----------CTCQKNYFHISKEQKARNLS
2OST Chain:A ((1-148))
---MGSTKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKTGNYVVDNRRTRTNRRNIVRSPYRGNDFDFAVAYVEELELFYVFPVDVFISYGSEIHLVETDKRQRKPRSFGYREAWHLILQKGAAQKE
General information:
TITO was launched using:
RESULT:
Template:
2OST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46430 for 697 contacts (-66.6/contact) +
2D Compatibility (PS) -12528 + (NN) 4316 + (LL) 588
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -57304.0 ( -82.22 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_2OST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OST-query.scw
PDB file :
Tito_Scwrl_2OST.pdb
: