Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEWLISDQLINYNYAVKFMEKKIQQIHNNSSDELVWLLQHPPLYTAGISATDD--DVV----EKLLPIYKTGRGGKYTYHGPGQRIIYLMLNLKKRNKCDIKLYIRELGSWIINVLKHFNIFGEFKEDRIGVWV----NNNGVEEKIAAFGIRLRKWITYHGIALNFSPDLSHYK-GIIP--CGLKG-------YGVTSIKELGVKAPLFKLDNILKKEFYKIF
3A7R Chain:A ((2-210))
-TLRLLISDSYDPWFNLAVEECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNT-CFTFMAGKPE-Y-D----KTISTSIVLNALNALGVSAEAS-GRNDLVVKTVEG----DRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHY
General information:
TITO was launched using:
RESULT:
Template:
3A7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102770 for 1493 contacts (-68.8/contact) +
2D Compatibility (PS) -20051 + (NN) -7172 + (LL) 728
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -136115.0 ( -91.17 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3A7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A7R-query.scw
PDB file :
Tito_Scwrl_3A7R.pdb
: