Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSMDPIIGASSRILRSTPRKLNLVADLVRNKKVSFATVQLRFCEKKAAGLIGKVLNSAIANAQYNYGLDIDNLYIKEILIGKSFTLHRVCPKAMGRANRVSKHYSNITIKLRQIV
1NWY Chain:Q ((26-126))
---------AVAKYVRMSPRKVRLVVDVIRGKSVQDAEDLLRFIPRSASEPVAKVLNSAKANALHNDEMLEDRLFVKEAYVDAGPTLKRLIPRARGSANIIKKRTSHITIIVAEKG
General information:
TITO was launched using:
RESULT:
Template:
1NWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 382406 for 4753 contacts (80.5/contact) +
2D Compatibility (PS) -10234 + (NN) -1455 + (LL) 472
1D Compatibility (HY) -400 + (ID) 550
Total energy: 370239.0 ( 77.90 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1NWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NWY-query.scw
PDB file :
Tito_Scwrl_1NWY.pdb
: