Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDAENALSQILNGTNRLEFYKLLSYISWLIYQVILSSIYVIKKVLQAKLKLEPIIILKKCKGHNDGSIALFANSVTITPGTLTIDVAKKRQIYLSIMCLIDESLESGVSEIENEVLKILCSIR
3DDW Chain:A ((393-466))
---------------------------------------LVEKLLPRHLE----IIYEINQKHLDRIVALFPKDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKD
General information:
TITO was launched using:
RESULT:
Template:
3DDW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25451 for 391 contacts (-65.1/contact) +
2D Compatibility (PS) -7117 + (NN) 4360 + (LL) 3976
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -31532.0 ( -80.64 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_3DDW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DDW-query.scw
PDB file :
Tito_Scwrl_3DDW.pdb
: