Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRFTLSWLLEHLETNASLEEITDKLTHIGLEVKDVVDNTKLA-GFIVAKVLEVTPHPNVDKLKLCKVDNGSKILQIVCGANNVREGLKTVLASLGSTLPESNFTIKPTKIRGVLSEGILCSASELMLAQEKSKGIIELSDD-YKVGNKFFNCDP---VIDINVTTNRGDCLSVHGIARDLAATGIGTLN--SLIYSSAIPAHDTGIQDRSKSGMTRSSSINVKVIDGESFISGVYISNVRNKESPRWLKDRLESVGMRSISAIVDITNYIMMSFGRPMHAYDAKKIEGKLIVRKANNGEKFTGLNGKEYLLNNDISVIS----DNNNIHAIAGIIGGKCSKCTLETTDVFLESAWFNPISVTKSSRQLNISTDSSYRFARSVDPGFILDGLHFAAQMIVDLCGGKASNVVFAGSLDEADTKVSFDYQDVNKFGSVSVLPDEMFDILTKLGFSTDKKTENNWNVKVPSWRSDVTIPADLVEEVVRIYGYDKIKEE-----PLIDN--VEVEINTHDNLRVLMISRGFHEVFTWSFMSESIAEKFGYSNKLFIIDNPFNNNFNIMRPSIVPNLLQVTADNIVHGMSDLA-IFEIGPVYDSLDQPKYSLSGIRTGN--NLPRNHYNTDRKIDVFDAKADLIAALELFNVSYGNLTIERAEKEYYHPGKSGTLSFKNKATGYFGELHPNILDLFDIKQKVVGFEMILENMGNLPVSREKFID-YKHQSVKRDFAFIVNRDVEVGKIINMVKKSS-ELITEVFVFDVYHGNNMEPNKMSIALSVTFCSPTHTLIEEEIQKESSAIVNLVHKNTGGILRYT |
4TVA Chain:B ((1-779)) | MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIERVFPIPRGVVFARVLEAHPIPGT-RLKRLVLDAG-RTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALSPRELGVG-EYGGGLLEFPEDALPPGTPLSEAWPEEVVLDLEVTPNRPDALGLLGLARDLHALGYALVEPEAALKAEALPL---------------PFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALFAAGMRPINNVVDVTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDGVERTLHPEDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTEASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPKPPEAIPFRPEYANRLLGTSYPEAEQIAILKRLGCRVEGEG-PTYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLALPAFFPAPDNRGVEAPYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFREREE--THLAGLLFGEGVGLP---WAKERLSGYFLLKGYLEALFARLGLAF---RVEAQAFPFLHPGVSGRVLVEGEEVGFLGALHPEIAQELELP-PVHLFELRL----PLPDKPLAFQDPSRHPAAFRDLAVVVPAPTPYGEVEALVREAAGPYLESLALFDLYQGPPLPEGHKSLAFHLRFRHPKRTLRDEEVEEAVSRVAEALRARGFGLRGLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -377980 for 6007 contacts (-62.9/contact) +
2D Compatibility (PS) -81244 + (NN) -17761 + (LL) 604
1D Compatibility (HY) -43200 + (ID) 11300
Total energy: -530881.0 ( -88.38 by residue)
QMean score : 0.425
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