Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSYMKNEQDIRSQGVYYSAGLRSYLTKVYNYMALA-LGITGLIA-----FLTVFF------DLFQVIYSNPVL---SIVVILSPIVLVFYMSH----------RLQYLSAQSTVTVFFLFSVLMGLSLSYIFIVYTTENIARAFF--ITSIMFGSMALYGNSTKKDLTSMGSFLIMGIWGLIIASIVNLFLGSSPLYFAIS-FISVIVFTLMTAYDAQRIKDVYYRYNDGSEAVTTKLAI----FGATNLYFDFINVFLNLLRLLNLFNNRD--- |
| 3H2U Chain:B ((39-317)) | LDPEEIRKRLEHTERQFRNRRKILIRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAEAAINAFHQSRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSR---CLCVDRLPPGFNDVDALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRVSFCAPGPPGRSMLAALIAAQATA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275590 for 1806 contacts (-152.6/contact) +
2D Compatibility (PS) -25414 + (NN) -1661 + (LL) 188
1D Compatibility (HY) 2000 + (ID) 1950
Total energy: -302427.0 ( -167.46 by residue)
QMean score : 0.173
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