Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYVTTKDITVTKATIAEDINQEIGLSKEDSAAIIDDILDEIKASLVKDGIVKISSFGTFLIKKKKERPGNVPNTSKKVVIQARNSVSFRPSKVIKKLINNQ
1P71 Chain:A ((1-89))
----------MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFSAGKLFREKVAPP
General information:
TITO was launched using:
RESULT:
Template:
1P71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6374 for 472 contacts (-13.5/contact) +
2D Compatibility (PS) -9502 + (NN) 803 + (LL) 764
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -18859.0 ( -39.96 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1P71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P71-query.scw
PDB file :
Tito_Scwrl_1P71.pdb
: