Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNIKLYYSSYLRYNIRSSLYIPFKPNILVKLDILKNEVLSLKTVSPEKVVEVSNLID-KFRLKILTDFQNFEKQWFQEFKNTWKQKLMPNMRSEYLGLHCTKIY
1IEI Chain:A ((248-296))
---------------------------VLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALLSCTSHKDYPFHEEF---------
General information:
TITO was launched using:
RESULT:
Template:
1IEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19249 for 225 contacts (-85.6/contact) +
2D Compatibility (PS) -4747 + (NN) 2518 + (LL) 2472
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -23556.0 ( -104.69 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1IEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IEI-query.scw
PDB file :
Tito_Scwrl_1IEI.pdb
: