Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYN-HPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGHHEGNVIMGQKGMHLNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEM--SPAEMPAALSEHRITGYSVAEPFGALGEKLG-KGKTLKHGDDVI----PDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMND-RKQSVDIMTHHF-KQSRDVLTQSAAWTS--YGDLTIKPSGYQEITTLVKQH--HLF-NPPAYDDFVEPSLYKEASRS |
| 3HN0 Chain:A ((4-282)) | ---------------------------------DTVIKVSVLRGPSVIAFADWLE--NPPIIDNK-KVQVKVVDSPDLAQALLIKQETDIAVLPMINAANLYNKGIKIKLAGCPIWGTLYLVEK-----TPL---KEPALYVFGNGTTPDILTRYYLGRQRLDY---PLNYAFNTAGEITQGILAGKVNRAVLGEPFLSIALRKDSSLRITADLNHLTDNDTLGFAQTAVVYTPTMEK----YRIAFEDALRASCQKAVRYPKETIHSLEEHGIFAQGALTPKSIERCKIYYLSAIEAKDAVMGFLRLIEQYEPKAVGGRLPDAGFIPEK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HN0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77836 for 2216 contacts (-35.1/contact) +
2D Compatibility (PS) -27620 + (NN) -5206 + (LL) 3740
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -112522.0 ( -50.78 by residue)
QMean score : 0.506
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