Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIILTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIA----GYFNHIDNLIMRILDVVFAIPSLLLAVAIIASFGASIPNL---IIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH |
4YMU Chain:C ((1-214)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQN-EAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGF---ADLTRQADIIQSVTYR-------YFEPYIIIAAIYFVMTLTFSKLLSLFERRL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148023 for 1495 contacts (-99.0/contact) +
2D Compatibility (PS) -20879 + (NN) 1092 + (LL) 18532
1D Compatibility (HY) -16400 + (ID) 1750
Total energy: -167428.0 ( -111.99 by residue)
QMean score : 0.216
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