Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKNILKSGIALSELGLG-CMSLGTDL--KKAEQIIDCAVENGITYFDTADMYDKGINESVVGKALLKY-QQRDDIFIGTKV---GNRLTKDGSTTWDPSKSYIKEAVKGSLKRLGIDHIDLYQLHGGTIDDPLDETISAFDELKQEGIIRAYGISSIRP-NVIDYYLKHSQIETIMSQFNLIDNRPE--------------SLLDAIHNNDVKVLARGPVSKGLLTSNSVNVLDNKFKDGIFDYSH---------------DELGETIASIKEIES-------NLSALTFSYLTSHDVLGSIIVGASSVDQLKENIENYHTKVGLDQIKTARARVKDLEYTNHLV |
| 4JTA Chain:A ((6-300)) | --RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-----SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY-------SVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACG--------IVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENI----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JTA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96152 for 2044 contacts (-47.0/contact) +
2D Compatibility (PS) -27150 + (NN) -12693 + (LL) 3696
1D Compatibility (HY) -20400 + (ID) 4050
Total energy: -156749.0 ( -76.69 by residue)
QMean score : 0.551
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