Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTLGRFLRLTTFGESHGDMIGGVLDGMPSGIKIDYDLLENEMKRRQGGRNIFTTPRKEDDKVEITSGVFEGFSAGTPIGFLIHNQRARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGGGRSSARESAIRVAAGAFAKMLLRE-IGVVCESGIIKIGGIEAKNYDF--------------NHALKSEIFALDKEQEEAQKTAIQNAIKNHDSIGGVALIRARGAKTNQKLPIGLGQGLYAKLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYNDLMSQKGFLSNHSGGVLGGMSNGEEIIVKVHFKPTPSIFQPQRTIDIKGNECECLLKGRHDPCIAIRGSVVCESLLSLVLADMVLLNLTSKIEYLKTIYNEN |
| 1R53 Chain:A ((1-371)) | MSTFGKLFRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLTRRRP------------DRVEIQSGTEFGKTLGTPIAMMIKN-----------------------------------------RETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGEIKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVTCVVRN------LPTGLGEPCFDKLEAMLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFY--RTKTNNSGGVQGGISNGENIYFSVPFKSV-----------------------RHDPAVTPRAIPIVEAMTALVLADALLIQKARDFS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149074 for 2268 contacts (-65.7/contact) +
2D Compatibility (PS) -30258 + (NN) -19599 + (LL) 4108
1D Compatibility (HY) -14400 + (ID) 5100
Total energy: -214323.0 ( -94.50 by residue)
QMean score : 0.517
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