Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------MTNEEMQVLLLMINNKKG-----NLRPSHKEFLQECLIEAVLHNK----------------------------NINKTTEYAIRNNIAHLPINKTEGFLVRTYN------HSLGIFNENIAE-------KLKIPKKEKEILQPLNANEKQV----LNTALENNEIDARTF-KPWDLGSKEASKENASMSEE-------------LTQNNSKLSHFNENSIAQNSVGQNNVKEPNTKSNNSKQNHSLSNSDLTSNTDYNKLVADMFENQMDANGNYIGK-KFSTQAYDNKTPYKVATGNASEYSSYLYSKKTKSKDIGMER |
2HZL Chain:A ((32-365)) | VTWRLASSFPKSLDTIFGGAEVLSKMLSEATDGNFQIQVFSAGELVPGLQAADAVTEGTVECCHTVGYYYWGKDPTFALAAAVPFSLSARGINAWHYHGGGIDLYNEFLSQHNIVAFPGGNTGVQMGGWFRREINTVADMQGLKMRVGGFAGKVMERLGVVPQQIAGGDIYPALEKGTIDATEWVGPYDDEKLGFFKVAPYYYYPGWWEGGPTVHFMFNKSAYEGLTPTYQSLLRTACHAADANMLQLYDWKNPTAIKSLVAQGTQLRPFSPEILQACFEAANEVYAEMEASNPAFKKIWDSIKAFRSEHYTWAQIAEYNYDTFMMVQQNAGKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 68370 for 1677 contacts (40.8/contact) +
2D Compatibility (PS) -25912 + (NN) 3212 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: 39770.0 ( 23.71 by residue)
QMean score : 0.139
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