Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCA-KPSKEVKTGDVISLHYLKGIEEYTILQIPTLKNVPRKDTHLYIAPKTKE
2VQE Chain:D ((99-152))
SRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKG
General information:
TITO was launched using:
RESULT:
Template:
2VQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36662 for 356 contacts (-103.0/contact) +
2D Compatibility (PS) -5449 + (NN) -249 + (LL) 0
1D Compatibility (HY) -800 + (ID) 700
Total energy: -43860.0 ( -123.20 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_2VQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VQE-query.scw
PDB file :
Tito_Scwrl_2VQE.pdb
: