Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFFLLKKFSEFLNTQTHFNLKRLNA------SSFLLETFSKEKH------AFVVDLSA-------PYIGLSKKPPES------------VLKNTLALDFCLN----------KFTKNAKILQ---ANVIDNDRILEIKGAKDLAYKSETFILR--LEMIPKKANLMILDQEK-------------CVIEAFRFNDRVAK-NDILGALPPNIYEH------------QEEDLDFKGLLDILE---KDFLSYQHKELEHKKNQIIKR-----LNAQKERLKEKLEKLEDPKTLQLEAKELQTQASLLLTYQHLINRRENRVILKDFEDKE-----CMIEIDKSMPLNAFI-------NKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVR----DAAEESVLEMFMPVKNSKIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWM---HVRDIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDAFNGYEIDYTQRKFVKIIKGAHVIYS--------KYRTISLKDT |
| 1N7V Chain:A ((1-555)) | -ANFNVPKLGVF-PVAAVFDIDNVPEDSSATGSRWLPSIYQGGNYWGGGPQALHAQVSNFDSSNRLPYNPRTENNPAGNCAFAFNPFGQYISNISSAQSVHRRIYGIDLNDEPLFSPNAASITNGGNPTMSQDTGYHNIGPINTAYKAEIFRPVNPLPMSDTAPDPETLEPGQTEPLIKSDGVYSNSGIASFIFDRPVTEPNPNWPPLPPPVIPIIYPTPALGIGAAAAYGFGYQVTVYRWEEIPVEFLNPEGSPCAYEAGIILVRQTSNPMNAVAGRLVPYVEDIAVDIFLTGKFFTLNPPLRITNNYFADDEVKENTVTIGNYTTTLSSAYYAVYKTDGYGGATCFIASGGAGISALVQLQDNSVLDVLYYSLPLSLGGSKAAIDEWVANNCGLFPMSGGLDKTTLLEIPRRQLEAINPQDGPGQ--YDLFILDDSGAYASFSSFIGYPEAAYYVAGAATFMDVENPDEIIFILRNGA-GWYACEIGDAL-KIADDEFDS--VDYFAYRGGVMFIGSA-RYTEGGDPLPIKYRAIIPGLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35922 for 2885 contacts (12.5/contact) +
2D Compatibility (PS) -42621 + (NN) 22729 + (LL) 1308
1D Compatibility (HY) -11600 + (ID) 4050
Total energy: 1688.0 ( 0.59 by residue)
QMean score : 0.131
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