Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVGDNLRKVDQKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAYKESKGASLETKFTDEALELTMSVDLYKADKDSVASLLGGTTDPKNVSLKETVKQFEAQGFKKKES |
4W8N Chain:B ((34-67)) | -------------------------------------------------------------------------------------------------------------------------------YAADKESTQKAIDGITNKVNSVIEKMNTQFEAVG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1935 for 113 contacts (17.1/contact) +
2D Compatibility (PS) -3103 + (NN) 2394 + (LL) 10004
1D Compatibility (HY) 0 + (ID) 650
Total energy: 10580.0 ( 93.63 by residue)
QMean score : 0.222
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