Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKADEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTIINAESAFTNATK-AENKMW-RIKSDPAHVAFLPASGVDAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNAD--------------APLETTIKGMKTVLLGYDCRMSQQS--P-------AYLERIVKDVKKYK-KEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF |
| 2Z1A Chain:A ((28-245)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------FTLTLVHTNDTHAHLEPVELT-------LSG-EKTPVGGVARRVALFDRVWA--RAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRYRAMALG-NHEFDLGPGPLADFLK---GARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGED-------LKLARRL--VGVQVIVGGHSHTLLGS------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56547 for 1519 contacts (-37.2/contact) +
2D Compatibility (PS) -19638 + (NN) 1451 + (LL) 17676
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -64008.0 ( -42.14 by residue)
QMean score : 0.280
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