Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGASAIGILTITPSEASIIASDIATKSGDVRIGFIDRFSGSVVLTGDVSSVESALQQVVFSLHEILDFSIPKITRS
3CGI Chain:A ((7-116))
------TDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT
General information:
TITO was launched using:
RESULT:
Template:
3CGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84821 for 817 contacts (-103.8/contact) +
2D Compatibility (PS) -11763 + (NN) -4204 + (LL) 80
1D Compatibility (HY) -13200 + (ID) 3850
Total energy: -117758.0 ( -144.13 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3CGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CGI-query.scw
PDB file :
Tito_Scwrl_3CGI.pdb
: