Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKICGLKKAVDVAAAVENGADMIGFVFA-KSKRQVTVDEAHELAKNIPAGVKKVGVFVNPTEEELTAAIKGVPLDIVQLHGQEPAEQANRTD--AEVIKAFPVKDGKLPDNINDYPNAYILLDAPAEEYEGGSGKTFDWDKIDRDLLTKN-KLIIAGGLNAQNVQEAIKRFEPYAVDISSGVET-NGEKDPQKIKCFIKTAKGVE
1V5X Chain:A ((1-199))
MRVKICGITRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEEPPEWAEAVGRFYPVIKAFPLEGPARP-EWADYPAQALLLDGK----RPGSGEAYPRAWAKPLL-ATGRRVILAGGIAPENLEEVLA-LRPYALDLASGVEEAPGVKSAEKLRALFARLASL-
General information:
TITO was launched using:
RESULT:
Template:
1V5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75844 for 1630 contacts (-46.5/contact) +
2D Compatibility (PS) -21796 + (NN) -15935 + (LL) 748
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -129377.0 ( -79.37 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_1V5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V5X-query.scw
PDB file :
Tito_Scwrl_1V5X.pdb
: