Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYHSPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGRKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVE------VEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFDG
3G0Q Chain:A ((26-215))
---------------------------RDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYY-SRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLV--TDDIAKCSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQ-------------
General information:
TITO was launched using:
RESULT:
Template:
3G0Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92718 for 1328 contacts (-69.8/contact) +
2D Compatibility (PS) -18576 + (NN) -11677 + (LL) 3584
1D Compatibility (HY) -12800 + (ID) 2200
Total energy: -134387.0 ( -101.20 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3G0Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G0Q-query.scw
PDB file :
Tito_Scwrl_3G0Q.pdb
: