Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTETKEEKVHKVFEKISPSYDRMNSVISFKLHVKWRKETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADLHNVELIHGNAMELPFPDNSFDYVTIGFGLRNV--PDYMQVLREMYRVLKPGGQLACIDTSQPNIPGWKQVFNAYFR----YVMPV-----------FGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVRYISHSGGASATHFGFKKKEQ
4MWZ Chain:A ((51-228))
------------------------------------------IQLDANSKVLDIGSGLGGGCKYINEKYG--AHVHGVDICEKMVTIA--KLRNQDKAKIEFEAKDILKKDFPESTFDMIYSRDSILHLSYADKKMLFEKCYKWLKPNGILLITDYCADKIENWDEEFKAYIKKRKYTLMPIQEYGDLIKSCKFQNVEAKDISDY-WLELLQLELSKLEEKKEEF-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90234 for 1087 contacts (-83.0/contact) +
2D Compatibility (PS) -17129 + (NN) -3129 + (LL) 5360
1D Compatibility (HY) -12800 + (ID) 2150
Total energy: -120082.0 ( -110.47 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_4MWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MWZ-query.scw
PDB file :
Tito_Scwrl_4MWZ.pdb
: