Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKRQTKFCKESLVIKTSRVFPSDTNNHNTLFGGRLMTYIDDTASISASRHCRTEIVTASTDSVDFLKPIKNDHSVCLESYVASTGRSSMEIFVKIIAENL--KTGERYLAATSFLTFVALGADGKTVEVPLVEPETEEQKRIHAGAEARSIARKIRLKENQSLAESLSTDIPW
4ZV3 Chain:C ((184-306))
-------------------VGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQKRYRAASAFFTYVSLNQEGKPMPVPQLVPETEDEKK--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4ZV3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66572 for 834 contacts (-79.8/contact) +
2D Compatibility (PS) -12955 + (NN) -1178 + (LL) 4396
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -86309.0 ( -103.49 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_4ZV3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZV3-query.scw
PDB file :
Tito_Scwrl_4ZV3.pdb
: