Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQVVKMFGDWEPWWFIEGWEEDITEIAEYDTLSEALLYFQEEWDRGQEKWPYFQSKSSLLATFWSIKEKRWCEECDEYLQQYHSLMLLKEWQEIPKEESIERFEVFNKIAELPSACSLNL
4PJJ Chain:A ((449-479))
---------------------------------------------------------------------------CNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEAR
General information:
TITO was launched using:
RESULT:
Template:
4PJJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3639 for 128 contacts (-28.4/contact) +
2D Compatibility (PS) -3336 + (NN) -1428 + (LL) 6528
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -3725.0 ( -29.10 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_4PJJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PJJ-query.scw
PDB file :
Tito_Scwrl_4PJJ.pdb
: