Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTLRQVTLKNTHQTSGIDKWISWLKK-----DISVRNRHKSKKLSLKKQRKV----VQLFNNLFA-SGFSLTDMVTFLKRSKLLS-DYYTDRMNKALLEGKDLSKMLGEL---GFSDTVITQ-VALADLHGNISRSLLKIESYLAN----LLLVRKKVIEVATY---PLILLTFLVLIMIGLRHYLMPQLGENNFATSL-ITNVPNIF-------------LLLLAVVLIF---------SLIFYIVQKRLS----RIKVACFLTTIPLVGS-YVKLYLT----------AYYAREWGNLLSQGVELDQIVKVMQNQKSKLF-REIGYDME-----EGFLSGK---AFHQKVLDYPFFLTELSLMIEYGQVKAKLGTELDI-YADEKWEDFFTK-------------LARATQLIQP-----VIFIFVALIIVMIYAA---------MLLPMYQNMEILS------------------------------- |
| 4GA6 Chain:A ((1-493)) | MKAKIRILDMFSGRYTVLINEEDAKEAKLHPDDLVKIEAGKKAVYGSVALSNLVGKGEVGISRDVLDLHNFSEGETVSVIPAGTPESVRYIKKKMHGEKLRKVEIEAIVRDIVDRKLRDIEISSFVTALEINGLDMDEIAALTIAMAETGDMLDIDRKPIMDVHSIGGVPGNKTNILVVPIVAAAGLTIPKTSSRAITSAAGTADVVEVFADVSFSLDEIKRIVEKVGACLVWGGALNLAPADDITIKAERALSIDPTGLMLASIMSKKYAMGSQYVLIDIPTGKGVKVETVEEARSLARDFIELGKRLGQYVEVAITYGGQPIGHTVGPALEAREALSALMTGKGPGSLIEKATGLAGILLEMGGVAPAGTGKKMAKEILESGKAWEKMKEIIEAQGGDPNIKPEEIPIGDKTYTFTAATSGYVTAIDNRAITAIARAAGAPEDKGAGIELYVKVGEKVKEGDPLFTIHAEHEARLDQAIVLARRTEPIRIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243561 for 2849 contacts (-85.5/contact) +
2D Compatibility (PS) -37912 + (NN) 1330 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -294143.0 ( -103.24 by residue)
QMean score : 0.220
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