Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEKLLVPALNCLLGLLFLGDHWFLFRLQNGELFAIVTLILLCTTSFLINKNHPKNLTLISMIITFLAVLSFLSTFLLA
1IBK Chain:V ((1-24))
----------------------------GKGDRRTRRGKIWRGTY----GKYRPRK-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1IBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 568 for 120 contacts (4.7/contact) +
2D Compatibility (PS) -2571 + (NN) -1844 + (LL) 6132
1D Compatibility (HY) 2000 + (ID) 250
Total energy: 4035.0 ( 33.62 by residue)
QMean score : 0.016
(partial model without unconserved sides chains):
PDB file :
Tito_1IBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBK-query.scw
PDB file :
Tito_Scwrl_1IBK.pdb
: