Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIVILWL------MSKGLGTDVKTFYTQAYKPGGDLIFWFLN--PATIAFAV----------------------PLYKKNDVV----KKYWVEILSSLVI--------------GMIVSLMLIVAISKMVGLSQVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVII-YALGKKLVSFFHLNDSKIGAG-LGLGTSGHTVGAAFALELGELQGAMAAIAVVVIGLVV------------------DLVIPIFSHLIGLL------ |
4R1D Chain:B ((1-301)) | MD--KTGWITHCFGRFLIDLPPDA-VINAGYYLW---------GDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQV--ERFGVGVTFPEHPGARFEFRSSTGAELNSLLERVDGFVQNMLSTFAGMETLRKGKHPVGSLPGEEYLVAGSDKGQRGYTFMWEVQGKEESLTEP-NLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225352 for 1536 contacts (-146.7/contact) +
2D Compatibility (PS) -23701 + (NN) 1540 + (LL) 1568
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -255595.0 ( -166.40 by residue)
QMean score : 0.120
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