Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFKILTDSTSDLDEKWAQEHNVDIIGLTIELDGKTYET--VGDEKITSDFLLERMQEGAKPTTSQINVGQFEEVFSTYAENDHALLYLALSSHLSGTYQSATIAREMVLDKYPDAQIEIVDTMAASCGEGVLAMLATKERQEGKSLEEVKQKIESLLPKLNTYFLVDDLNHLMRSGRLSKGAAIIGSVAKIKPLLKLDSEGKLVPFAKTRGRKKGIKEIVTQATKTLSYSTLIIAYSGEKDSAQVMKEQLLADERIEEVIIRPLGPVISAHVGSGALALFSLGEENR |
3PL5 Chain:A ((36-320)) | -TFKILTDSTADLPESWTQENDVQVLGLTVQLDGITYETVGPD--RLTSRVLLEKIAAGSKPTTSQVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEIVDTLAATGGEGYLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLS--------LVNIKPLLWLDASGKLVPIAKLRGRKKGMKEMLKRATADVAHDTAVVAYANDSEAAENLKEQLLANEKIKNVVTLPLGPVISTHVGPNTLAVFTIGKEAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150279 for 2419 contacts (-62.1/contact) +
2D Compatibility (PS) -30352 + (NN) -8358 + (LL) 624
1D Compatibility (HY) -29600 + (ID) 8100
Total energy: -226065.0 ( -93.45 by residue)
QMean score : 0.622
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