Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIHKYPSKKAKNGYLYLVKVYMTRDGQRADHIKRGFRTRKEAKDYEARLIYLKASGKLEEFIKPTHKTYNEIFEKWYQAYQDTVEPTTASRTLDMFRLHILPVMGDL--PISKISPLDCQNFIIEKAKV---FKNIKQIKSYTGKVFDFAIKMKLLKHNPMTEII--MPKRK---KTRIE-----NYWTVQELQEFLAIVLQEEPYKHYALFRLLAYSGLRKGELYALKWADIDFQS-ETLSVNKSLGRLDGQAIEKGTKNDFSVRRIKLDSETISILQEWKANCQKEKAQLAVAPLSIEQDFIFTYCTRSGS-------IEPLHADYINNVLSRIIR-------KHGLR--KISPHGFRHTHATLMIEIGVDPVNTAKRLGHASSQMTLDTYSHSTTNGEDKSIKQFADYLKAK |
| 1XO0 Chain:A ((36-340)) | -----------------------------------------------------------------------------------AFSEHTWKMLLSVCRSWA-AWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLKIAEIARIRVKDISRTDGGRMLIHIGRTK---------TLVSTAGVEKALSLGVTKLVERWISVSGVAD---------DPNNYLFC--RVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIV-MNYIRNLDSETGAMVRLLED----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94484 for 1842 contacts (-51.3/contact) +
2D Compatibility (PS) -28076 + (NN) -1784 + (LL) 8404
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -121590.0 ( -66.01 by residue)
QMean score : 0.413
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