Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIEALMEKERRVQYRLLSFLRGSPQAIALKLALLETGLSRATLLKYINNLNSYFEQEKVNCRIVYYKDKLFLEEDYNLSNQEVLKALMKDSIKYTILISLFNQRQFTIVGLSQELMVSEATLNRHLAHLNELLAEFDIAISQGKQIGDELQWRYFYYELFKQLWSYDKCQNMIKKLDLDSLILLIERLAQHTLTREAQQNLGLWFSICHHRLLAMEKISDNLKPIVEHYQCNAFYKRLDAALVLYMSRFALEYREGEVLATFAFLHSQNILPINTMEYIMGFGGPIIDCVTETIIYFKKESILADETSDQVIYQLGQLYSHYYFFKGHILVEQPDLEQTYRLIDHNMRDKLHHISKKIIANVNRIRPLTEDGCSLLTLHLLELLIFSKNSQKMPFRIGLDMTGNAVEQSLLEYRIRQHFSGNNS---IQVEPYD---E-GKGFDMVIYQSRSRPY----------KAKLTYCLNK--GASERELQEIDSLIYDN |
2L2Q Chain:A ((3-101)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMNILLVCGAGMSTSMLVQ-RIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINTIDYGT-MNGEKVLQLAINA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2L2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -45206 for 493 contacts (-91.7/contact) +
2D Compatibility (PS) -8659 + (NN) -3946 + (LL) 35120
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -26691.0 ( -54.14 by residue)
QMean score : 0.404
|
|
|