Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLEIAKVYLQGLGLASITVILVGIIWVFWRAKKNIDKTARERQSVLYDVLLIALMTAPILAFAFVAIILMIKA
4FTB Chain:D ((1-21))
--------------------------ASMWERVKSIIKSSLAAASNI---------------------------
General information:
TITO was launched using:
RESULT:
Template:
4FTB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3624 for 77 contacts (47.1/contact) +
2D Compatibility (PS) -2266 + (NN) -670 + (LL) 6812
1D Compatibility (HY) -400 + (ID) 250
Total energy: 6850.0 ( 88.96 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_4FTB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FTB-query.scw
PDB file :
Tito_Scwrl_4FTB.pdb
: