Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKDDSLTLHTDLYQINMMQVYFNKGIHNKRAVFEAYFRKVPFENGYAVFAGLERIVRYLENLSFSDSDLSYLEEL--GYPEEFLDYLKNLKMEL---TVKSAKEGDLVFANEPLVQIEGPLAQCQLVETAILNIINY---------------QTLVATKAARIRSVIEDEPLLEFGTRRAQEMDAA--IWGTRAAIIG-GANATSNVRAGKIFNIPVSGTHAHALVQTYG-------DDYQAFKAYAETHK-D-CVFLVDTYDTLRVGVPNAIRVAKEMGEKINFLGVRLDSGDLAYLSKKVRQQLDDAG-FPNAK-IYASNDLDENTILNLKM--QKAKIDVWGVGTKLITAY--DQPALGAVYKIVSIET-DAGSMRDTIKLSNNAEKVSTPGKKQVWRITSRAKGKSEGDYITFADTDVTQLDEIEMFHPTYTYINKTVRDFDAVPLLVDIFDKGKLVYQLPSLQEIQEYGRKEFDQLWDEYKRVLNPQDYPVDLARDVWQNKMDLIDRIRKEALAKGEVR |
| 2IM5 Chain:A ((5-377)) | -----RSILDTDLYKFTTGYAYAKLF-PRAYGEFRFIDR-NRQGFTEEFAELVRGEIRAMAALSLTRDEKEFLQRELPYLPPIYIDFLDGFRFDPEEVTVSIDAQGH------LDIRAQGLLYRVTLWETPILAVISELYYRFIGAEPDWKQVEEVTRSKGELMRE-H-RATFSIFGMRRRFSLEVEDRVTDILKQYAGESLFGTSNVHLAHKHGLRVSGTHPHEWIQFHGAIYGYKMANYVAMEDWINVYDGDLGTVLTDTYTTDVF-MRNFSKKHA-----MLFTSLRHDSGDPEIFIEKAVRRYEELRVDPKIKYIIFSDSLTPQRAIEIQKLCAGRIKASFGIGTNLTNDVGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKHTGEPEEILLAMNTLGI--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124012 for 2752 contacts (-45.1/contact) +
2D Compatibility (PS) -35618 + (NN) -8467 + (LL) 9508
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -175239.0 ( -63.68 by residue)
QMean score : 0.460
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