Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAV-IHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
2OST Chain:A ((1-148))
---------MGSTKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKTGNYVVD---NRRTRTNRRNIVRSPY-------------------------------RGNDFDFAVAYVEELELFYVFPVDVFISYGS--------EIHLVETDKRQRKPRSFGYREAWHLILQKGAAQKE-
General information:
TITO was launched using:
RESULT:
Template:
2OST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59656 for 996 contacts (-59.9/contact) +
2D Compatibility (PS) -15405 + (NN) -1506 + (LL) 4232
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -77435.0 ( -77.75 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_2OST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OST-query.scw
PDB file :
Tito_Scwrl_2OST.pdb
: