Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFENIIYGIDGNVATIMLNRPDISNGFNIPMCQEIIDAIRLVSENKDVMFLVIEAQGPIFSIGGDLKVMKA-----AVESDDISSLTKIAELVNQISYDLLQLEKPVVMCVDGAVAGAAANIALAADFVIASKKSKFIQAFVGVGLAPDAGGLLLLSKSIGITRAVQLALTGESLSAEKAEALGIVYKLCESDKIGKIKDQLLKRLSRHSINSYQAIK---SLAWEAAFKDWEQYKKLELQLQESLAFKQDFKEGVRAHADRRRPNFLGK |
4FJW Chain:D ((1-256)) | MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLA-----------AVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPQIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYER---RLFHSAFATEDQSEGMAAFIEKRAPQFTH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148720 for 2005 contacts (-74.2/contact) +
2D Compatibility (PS) -27227 + (NN) -9093 + (LL) 1576
1D Compatibility (HY) -7200 + (ID) 3450
Total energy: -194114.0 ( -96.81 by residue)
QMean score : 0.493
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