Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYDQINSYLVDIFNRIMIIEEMSLKTSQFSDVSLKEMHTIEIIGKHSEVTPSDVARELMLTLGTVTTSLNKLEKKGYIERKRSSIDRRVVHLSLTKRG-RLLDRLHSKFHKSMVSHIIEDLGEEDIKMLTSALGNLHKFLEDLV
3VOE Chain:A ((37-135))
-------------------------------DITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQLVGQDLHQELTKNLTADEVATLEYLLKKVLP------
General information:
TITO was launched using:
RESULT:
Template:
3VOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32397 for 612 contacts (-52.9/contact) +
2D Compatibility (PS) -10066 + (NN) -2929 + (LL) 3072
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -50670.0 ( -82.79 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3VOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VOE-query.scw
PDB file :
Tito_Scwrl_3VOE.pdb
: