Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIMEKYTSIKQSGRHYGLDLLRIISMFMIVITHVLGKGGLRSSVEGHADSYFIVTWIIQVLVYGAVNCYALISGYVGINSRYRYSKLLSIWAQVFFYTFTITALFAITGHEV----TLLNWRDAFFPIVSGQYWYITAYFGLLVFMPVINNGLNALTDKQLKQLVLLMFIIFSILPAVLNNRVPEFSLSKGFEMTWLLILYIIGAYLKRIDLNIFKTSYLLIIYLLSLVATYAMKFSVGDIWYWYVSPTLTLGAVSLFILFARASIKPSGFLKKIIVVLAPSTLGVYLCHLHPLIVKYFVRDFAETFVYESIYLYPFLILGAGILIYLLA-FIVERIRLRIFKAIHFSNFLRWFDDKFPY |
4XGC Chain:B ((62-352)) | --EGSINAIMEEYRSY-------FPKWMCILN------------EGF-----------NILLYGLGSKHQLLQSFHR--EVLHKQTVLVVNG--FFPSLTIKDMLDSITSDILDAGISPANPHEAVDMIEEEFALIPETHLFLIVHNL--DGAMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWDCTTMLPYTNETAFENS-LLVLALSSMRSVFSS---------------LTTNSRGIYMLIVKYQLKNKG-------------------NATGMPFRDLYSSCREAFLVSS-----DLALRAQLTEFLDHKLVKSKRSSEQLTIPIDGALLQQFLEEQE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296739 for 2016 contacts (-147.2/contact) +
2D Compatibility (PS) -28365 + (NN) 1505 + (LL) 6652
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -330447.0 ( -163.91 by residue)
QMean score : 0.250
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