Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIWSHLFAIVSILGIWYYHVKIDHLMVILLASVLSLEMGFIAYYSRNIFIRLLASLGLLFFYPQSLGIFLSLVSLEWSTKDIWQSNHFMQYMAYLLAILFIISSALLSLKLLVNAYDISKRYQLATVIPVMLFSSFAFCLEKSGSLGLEGIILNPSAFFNGIQTNMANLDFKALSCLFLVQLLLWGILMED |
4RFO Chain:N ((2-27)) | -----------------------------------------------------------------------------------------------------------------------------------------NLHFCQLRCKSLGLLGRCATCACV--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2975 for 117 contacts (-25.4/contact) +
2D Compatibility (PS) -2706 + (NN) -2376 + (LL) 17520
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 7513.0 ( 64.21 by residue)
QMean score : 0.159
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