Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MEKFFKLKEHGTTIRTEITAGLTTFFAMSYILFVNPAILSQTGMPAQGVFL--ATIIGAVVATSVMAFYANLPYAQAPGMGLNAFFTYTVVFALGYTWQEALAMVFICGLISLIITLTKVRKMIIESIPTTLKSAITAGIGTFLAYVGIKNAGFLKFSIDPGTYDVVGKGAAKGLATITANSSATPGLVSFDNPAILLSLIGLSITIFFIVKG-----IRGGIILSILTTTLLGILMGVVKLDAI----NWEATNLSASFRDLKQVFG-VALGEKGLISLFSNPSRLPSVL-MAILAFSLTDIFDTIG----TLIGTGEKVGILATTGDNHESKSLDKALYSDLIGTTFGAICGTSNVTTYVESAAGIGAGGRTGLTALVVAGLFAISSFFSPLVSIVPSQATAPILVIVGIMMLSNLKDIKWDDMSEAIPAFFTSLFMGFTYSITYGIAAGFLTYTLAKVIKGQAKDIHVVLWILDILFILNFISLAIL--- |
| 4QIQ Chain:A ((7-470)) | SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSN-------------------RFGRRDSLKIAAVLFFISGVGSAWPELG------FTSINPD---------NTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK--FGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMS--WGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKN------------------SWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -272579 for 3428 contacts (-79.5/contact) +
2D Compatibility (PS) -41116 + (NN) 14930 + (LL) 4592
1D Compatibility (HY) -27200 + (ID) 3500
Total energy: -324873.0 ( -94.77 by residue)
QMean score : 0.214
|
|
|