Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MI---------NDKNRYRGSLLAQSIL-----KEKVTRTVTKDEMLETVNLDYRRLIIIQLVSIAFGGMAIWCLIALVLLTVVGILICSLHNDLPFVTAIPIESPIKMIWLEGWQINVAIGLIGTFGIFLDKWATNKMDALREATDKKQLTKDYLAWKEEHNG
2JOZ Chain:A ((1-135))
MIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMAYKVISQS----------TDGSIEIQYLGPYYPLKSTLKRGENGTLIWEQNGQRKTMTRIESKTG--------------REEKDEKSKSLEH----HHHHH
General information:
TITO was launched using:
RESULT:
Template:
2JOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31005 for 731 contacts (-42.4/contact) +
2D Compatibility (PS) -13567 + (NN) -2917 + (LL) 3488
1D Compatibility (HY) 400 + (ID) 1300
Total energy: -44901.0 ( -61.42 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_2JOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JOZ-query.scw
PDB file :
Tito_Scwrl_2JOZ.pdb
: