Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQKSNYFKGQIDYAVVIPVFFLLMIGLASIYVATMNDYPSNIYIAMFQQVSWIIMGCIIAFVVMLFSTEFLWKATPYLYALGLTLMVLPLIFYSPQLFAATGAKNWVTIGSVTLFQPSEFMKISYILMLSRITVSFHQKNRKTFQDDWKLLGLFGLVTLPVMILLMLQKDLGTALVFLAILSGLILLSGISWWIILPILSTIVLFIASFLMIFISPNGKEWFYNLGMDTYQINRLSAWIDPFSFADSIAYQQTQGMVSIGSGGVTGKGFNILELSVPVRESDMIFTVIAENFGFIGSAIVLGLYLIIIYRMLRITIESNNQFYTFISTGFIMMIVFHVFENIGAAVGILPLTGIPLPFISQGGSSLLSNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI |
4CI0 Chain:C ((2-281)) | ----------------VLGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDE---GIIEGAVVAGPGEEFWKPQPMVAM------------SSDELKAAAGTKY------------------TFSPNVMMLKKAVRQYGIEK----------LGTVAIPCQTMGIRKMQTYP-------FGVRFLADKIKLLVGIYCMEN---FPYTSLQTFICEK-------LGVSMELVEKMD---------------IGKGKFWVYTQD-DVLTLPLKETHGYEQAGCKI----CKDYVAELADVSTG------------SVGSPDGWSTVITRTDAGDSIFKQAVEAG------LFETKPIEEVKPG----LGLLEKLAAQKKEKAEKNIAARKEMGLPTPF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309373 for 2376 contacts (-130.2/contact) +
2D Compatibility (PS) -29582 + (NN) -4459 + (LL) 11720
1D Compatibility (HY) 800 + (ID) 2100
Total energy: -332994.0 ( -140.15 by residue)
QMean score : 0.252
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